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Status of NE-CAT Sector 24 ActivitiesAugust 2006
24-ID Phase 1 Beam Line User Operations The APS 2006-2 run cycle, June through August, concluded August 25. During that period, the Phase 1 beam line was heavily utilized by NE-CAT’s institutional users. More than 29 groups used the beam line to screen nearly two thousand crystals and collect more than 430 complete data sets. During this entire period the beam line ran very well with virtually no outages due to problems with the beam line itself. The only minor problems encountered by users, of the order of hours and not days, were problems encountered with the accelerator itself. In one incident, loss of injection resulted in decay of the stored beam over a period of a day but the users were still able to take data. Also, several hours of instabilities in beam position were experienced during start up after scheduled one and two day APS maintenance periods requiring users to check and readjust the beam position before taking data until the ring and optics attained equilibrium. All users reported in their “End-of-Run Summary Forms” that they were successful and pleased with the entire beam line operations. The accelerator is now down during the month of September for scheduled preventative maintenance. Starting with resumption of APS operations on October 3, for the 2006-3 run, 25% of the beam time on Phase 1 will be devoted to APS General Users. Institutional and NE-CAT program users will not suffer loss of the full 25% of beam time allocated to General Users since the sizable amount of internal development time allocated during the 2006-2 run for installation and testing of the Phase 2 monochromator will not be needed during this run. The disk storage space allocated to GPFS has been nearly doubled from 8.5 TB to 15 TB to accommodate user needs and maintain the policy that user data will remain available on the data storage system for at least 30 days. During the shut down in September, the monochromator second crystal will be remounted. During 2006-2 operations, it was noted that the temperature of the second crystal was continually increasing due to changes in the heat conductivity between the crystal and its cooling block, presumably due to changes at the interface layer. A new crystal cooling block has been designed, is now being fabricated, and will be installed during the current shutdown to re-establish good solid thermal conductivity.
24-ID Phase 2 Fixed-Energy Beam Line Installation During August, testing and calibration of the beam line optics took place. The results of the optical testing were “much better than expected at this early period of commissioning”. The optics functioned very well and reliably, beam at the sample position was very well focused, and within the limitations of the measurements no vertical instabilities were observed due to floor vibrations or liquid nitrogen cooling flow. Testing of the monochromator itself continues to remain limited due to several problems with the nanomotors and a picomotor supplied by the vendor as well as fundamental design problems. The vendor has committed to supplying a completely re-designed crystal roll cage. Unfortunately, the vendor could not meet the original installation date during the September accelerator shutdown period due to delays incurred in component deliveries from its suppliers. Installation is now scheduled for the January APS maintenance shutdown period. However, we believe that we will be able to schedule some institutional users during the 2006-3 run on the Phase 2 beam line to aid in crystallographic commissioning of the beam line and, therefore, not incur any significant delay in the schedule for completion of the beam line.
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Recent Highlights7/07/08 June status report now online. 06/24/2008 NE-CAT Hires Three New User Support Staff (More Info)
06/12/2008 May status report is now available. 05/06/2008 NE-CAT organizes a successful workshop titled “Software for Challenging Cases in Macromolecular Crystallography” at APS User Week 2008. A photo of the organizers and speakers is shown. Presentations can be found here. 4/04/2008 Featured Publication Crystal Structure of a Self-Spliced Group ll Intron Navtej Toor, Kevin S. Keating, Sean D. Taylor, and Anna Marie Pyle Science 4 April 2008, Vol. 320. No. 5872, pp. 77-82 04/01/2008 With the success users have had using the MD2 Microdiffractometer on 24-ID-E, NE-CAT is acquiring a second MD2 for 24-ID-C, delivery October 2008 2/27/2008 NE-CAT hosting the workshop “WK04, Software for Challenging Cases in Macromolecular Crystallography” to be held May 6, 2008 at APS User Week. See the APS User Meeting Website 1/22/2008 Modified ALS sample placement robotic system installed on 24-ID-C beamline Resource Advisory Committee Meeting Held NE-CAT Director Steven Ealick Provides Introductory Overview 16x16x300 micron crystal irradiated at 5 different positions using a 20 micron beam with the MD2 microdiffractometer to obtain a complete data set with a radiation-damage sensitive crystal First Data Frames Obtained Using the MD2 Microdiffractometer (see additional pictures) MD2 Microdiffractometer Installed on 24-ID-E beamline 5/22/2006 Phase 2 Vertical Focusing Mirror in Place. |
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